Squidpy 1.1.1 (2021-08-16)

Features

• Allow defining cylindrical shells in squidpy.gr.spatial_neighbors() by using the radius argument. Also rename n_neigh, n_neigh_grid arguments to n_neighs. #393

• Allow specifying gene symbols from :attr:anndata.AnnData.var in squidpy.gr.ligrec(). #395

Bugfixes

• Fix sometimes incorrectly transposing dimensions when reading TIFF files. #390

Miscellaneous

• Increase performance of Delaunay graph creation in squidpy.gr.spatial_neighbors(). #381

• Update mypy type-checking and use PEP 604 for type annotations. #396

Documentation

• Enable towncrier for release notes generation. #397