squidpy.im.ImageContainer.crop_center

ImageContainer.crop_center(y, x, radius, **kwargs)[source]

Extract a circular crop.

The extracted crop will have shape (radius[0] * 2 + 1, radius[1] * 2 + 1).

Parameters:

  • y (int | float) – Coordinate of the crop along the height dimension in the pixel space. If a float, it specifies the relative position and must be in [0, 1].

  • x (int | float) – Coordinate of the crop along the width dimension in the pixel space. If a float, it specifies the relative position and must be in [0, 1].

  • radius (int | float | tuple[int | float, int | float]) – Radius along the height and width dimensions, respectively.

  • kwargs (Any) – Keyword arguments for crop_corner().

Return type:

ImageContainer

Returns:

The cropped image of size size * scale.