Squidpy 1.1.1 (2021-08-16)
Features
Allow defining cylindrical shells in
squidpy.gr.spatial_neighbors()
by using theradius
argument. Also renamen_neigh
,n_neigh_grid
arguments ton_neighs
. #393Allow specifying gene symbols from
anndata.AnnData.var
insquidpy.gr.ligrec()
. #395
Bugfixes
Fix sometimes incorrectly transposing dimensions when reading TIFF files. #390
Miscellaneous
Increase performance of Delaunay graph creation in
squidpy.gr.spatial_neighbors()
. #381Update
mypy
type-checking and use PEP 604 for type annotations. #396
Documentation
Enable
towncrier
for release notes generation. #397