squidpy.experimental.im.ReinhardParams

class squidpy.experimental.im.ReinhardParams(luminosity_threshold=0.8, mask_background=True)[source]

Tuning knobs for Reinhard stain normalization.

Pass an instance (or a Mapping of field names to values) as method_params. Frozen so validation in __post_init__ cannot be silently bypassed by later mutation.

Methods

Attributes

`luminosity_threshold`	Normalised Ruderman Lab-L cutoff in `(0, 1]`; pixels brighter than this are excluded from the fit.
`mask_background`	If `True`, fit channel statistics over tissue pixels only; if `False`, use every pixel (vanilla Reinhard).